Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADK31252.1 | ADK31301.1 | BP951000_1263 | BP951000_1313 | Membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | ABC transporter ATP-binding protein. | 0.670 |
ADK31252.1 | ADK31688.1 | BP951000_1263 | BP951000_1707 | Membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | ABC transporter related protein. | 0.683 |
ADK31252.1 | lepB-2 | BP951000_1263 | BP951000_1658 | Membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Leader peptidase/signal peptidase I; Belongs to the peptidase S26 family. | 0.429 |
ADK31252.1 | lolC | BP951000_1263 | BP951000_0235 | Membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Lipoprotein releasing system transmembrane protein, LolC E family. | 0.488 |
ADK31252.1 | lolD | BP951000_1263 | BP951000_0234 | Membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Lipoprotein releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.699 |
ADK31252.1 | ompA-4 | BP951000_1263 | BP951000_1164 | Membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Outer membrane protein. | 0.584 |
ADK31252.1 | ybbA | BP951000_1263 | BP951000_0905 | Membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | ABC transporter ATP binding protein, YbbA. | 0.670 |
ADK31301.1 | ADK31252.1 | BP951000_1313 | BP951000_1263 | ABC transporter ATP-binding protein. | Membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.670 |
ADK31301.1 | ADK31776.1 | BP951000_1313 | BP951000_1796 | ABC transporter ATP-binding protein. | Hypothetical protein. | 0.702 |
ADK31301.1 | lolC | BP951000_1313 | BP951000_0235 | ABC transporter ATP-binding protein. | Lipoprotein releasing system transmembrane protein, LolC E family. | 0.690 |
ADK31688.1 | ADK31252.1 | BP951000_1707 | BP951000_1263 | ABC transporter related protein. | Membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.683 |
ADK31688.1 | ADK31776.1 | BP951000_1707 | BP951000_1796 | ABC transporter related protein. | Hypothetical protein. | 0.702 |
ADK31688.1 | lolC | BP951000_1707 | BP951000_0235 | ABC transporter related protein. | Lipoprotein releasing system transmembrane protein, LolC E family. | 0.690 |
ADK31776.1 | ADK31301.1 | BP951000_1796 | BP951000_1313 | Hypothetical protein. | ABC transporter ATP-binding protein. | 0.702 |
ADK31776.1 | ADK31688.1 | BP951000_1796 | BP951000_1707 | Hypothetical protein. | ABC transporter related protein. | 0.702 |
ADK31776.1 | lolC | BP951000_1796 | BP951000_0235 | Hypothetical protein. | Lipoprotein releasing system transmembrane protein, LolC E family. | 0.697 |
ADK31776.1 | lolD | BP951000_1796 | BP951000_0234 | Hypothetical protein. | Lipoprotein releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.702 |
ADK31776.1 | ybbA | BP951000_1796 | BP951000_0905 | Hypothetical protein. | ABC transporter ATP binding protein, YbbA. | 0.702 |
cutE | lepB-2 | BP951000_1333 | BP951000_1658 | Apolipoprotein N acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. | Leader peptidase/signal peptidase I; Belongs to the peptidase S26 family. | 0.452 |
cutE | lgt | BP951000_1333 | BP951000_0985 | Apolipoprotein N acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.459 |
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